PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_007801-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 159aa    MW: 17458.1 Da    PI: 10.5497
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_007801-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.2e-112970854
                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   + r+RR+ri ++f  L++l+P       +K++ +++Le+A++Y+k L
  NNU_007801-RA 29 AARQRRHRISDRFKILQSLVPGG-----TKMDTVSMLEEAIHYVKFL 70
                   569******************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.7392170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.77E-122774No hitNo description
SMARTSM003533.0E-132776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-122779IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-142893IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-83070IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MASAISKEKK RGGKRSKGVK LSTDPQSVAA RQRRHRISDR FKILQSLVPG GTKMDTVSML  60
EEAIHYVKFL KTQIWLHQAM MNFLHDDSSS SSSSTSLLSP PDLVYSSAAA LATPSLPPPP  120
PPPPATPLGS MSTMERVETP KLVRNNRLLY QTAYICDHG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010264777.12e-56PREDICTED: transcription factor bHLH140-like
SwissprotQ9M0412e-33BH140_ARATH; Transcription factor bHLH140
TrEMBLA0A151RGV21e-44A0A151RGV2_CAJCA; Transcription factor bHLH140 family
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.18e-32APRATAXIN-like